1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTAGACAGTTTTTTGGGTCAGCGTCGTGGAACAGATCACGAGGCTATGTTAAACATGAAAACTGAATTCATGGCTCTGTGGGATGGATTTACAACAGATCgtaagtttaacagttatcatattttattttgttgcataaatattgaaaataagttgcaaataagataatgacaattttgatagagatttagttggtaacataatgttctcaatttatttatatttgagtagatttgttgattggggtgacttattgtgtgtgtag
species | Glycine max |
transcript | GLYMA06G13800.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AAACATGAAAACTGAATTCATGGCTCTGTGGGATGGATTTACAACAGATC AGAATGCTCAAGTTATGGTTCTTGCAGCAACTAATCGTCCTTCAGAACTTGEST: gi|37996010|gb|CF807599.1|CF807599
genomic: AAACATGAAAACTGAATTCATGGCTCTGTGGGATGGATTTACAACAGATCgtaagtttaa ... gtgtgtgtagAGAATGCTCAAGTTATGGTTCTTGCAGCAACTAATCGTCCTTCAGAACTTG
EST: AAACATGAAAACTGAATTCATGGCTCTGTGGGATGGATTTACAACAGATC AGAATGCTCAAGTTATGGTTCTTGCAGCAACTAATCGTCCTTCAGAACTTG
genomic: AAACATGAAAACTGAATTCATGGCTCTGTGGGATGGATTTACAACAGATCgtaagtttaa ... gtgtgtgtagAGAATGCTCAAGTTATGGTTCTTGCAGCAACTAATCGTCCTTCAGAACTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAGACAGTTTTTTGGGTCAGCGTCGTGGAACAGATCACGAGGCTATGTTAAACATGAAAACTGAATTCATGGCTCTGTGGGATGGATTTACAACAGATCgtaagtttaacagttatcatattttattttgttgcataaatattgaaaataagttgcaaataagataatgacaattttgatagagatttagttggtaacataatgttctcaatttatttatatttgagtagatttgttgattggggtgacttattgtgtgtgtag
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