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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTGTGTGACTTCTGGTGGCACCACCGCGCCATTGGAACAACGATGTGTTCGCTATGTGGACAATTTCAGTTCAGGTCACAGAGGGGCCACATCCACTGAgtatgttgcactttgcatttgccttgttcttgttctgtaaatctttattttaatcctcttgaaaagaatggattggtggttgtgttgtag

Basic information

species Glycine max
transcript GLYMA06G11270.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151405351|gb|EV275165.1|EV275165
EST:     CGCTATGTGGACAATTTCAGTTCAGGTCACAGAGGGGCCACATCCACTGA                         GTATTTCCTGAAGGCTGGATATGGTGTTATCTTTCTGTACCGGAA
genomic: CGCTATGTGGACAATTTCAGTTCAGGTCACAGAGGGGCCACATCCACTGAgtatgttgca ... tgtgttgtagGTATTTCCTGAAGGCTGGATATGGTGTTATCTTTCTGTACCGGAA
EST: gi|193483760|gb|FK449307.1|FK449307
EST:     CGCTATGTGGACAATTTCAGTTCAGATCACAGAGGGGCCACATCCACTGA                         GTATTTCCTGAAGGCTGGATATGGTGTTATCTTTCTGTACCGGAAGAGAA
genomic: CGCTATGTGGACAATTTCAGTTCAGGTCACAGAGGGGCCACATCCACTGAgtatgttgca ... tgtgttgtagGTATTTCCTGAAGGCTGGATATGGTGTTATCTTTCTGTACCGGAAGAGAA