1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATCCTGGTACTGATGGAAATGGTCTGGGACAGATGATATCGCTCCGCCATCCCAAATCTGgtaatttgaagagtatccattactttattacttcttatcgtgttttttgttatttatatttaaatttatataaatatatgatttattgtaattgtctata...
species | Glycine max |
transcript | GLYMA06G08230.3 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGATGGAAATGGTCTGGGACAGATGATATCGCTCCGCCATCCCAAATCTG GAAATGCAACACAATATCTGTTTGTAAATGGAATGCTTCAGGAACTTCAGTEST: gi|8283180|gb|BE020741.1|BE020741
genomic: TGATGGAAATGGTCTGGGACAGATGATATCGCTCCGCCATCCCAAATCTGgtaatttgaa ... tgtttgacagGAAATGCAACACAATATCTGTTTGTAAATGGAATGCTTCAGGAACTTCAGT
EST: TGATGGAAATGGTCTGGGACAGATGATATCGCTCCGCCATCCCAAATCTG GAAATGCAACACAATATCTGTTTGTAAATGGAATGCTTCAGGAACTTCAGTEST: gi|151395314|gb|EV265185.1|EV265185
genomic: TGATGGAAATGGTCTGGGACAGATGATATCGCTCCGCCATCCCAAATCTGgtaatttgaa ... tgtttgacagGAAATGCAACACAATATCTGTTTGTAAATGGAATGCTTCAGGAACTTCAGT
EST: TGATGGAAATGGTCTGGGACAGATGATATCGCTCCGCCATCCCAAATCTG GAAATGCAACACAATATCTGTTTGTAAATGGAATGCTTCAGGAACTTCAGTEST: gi|192305677|gb|FG994359.1|FG994359
genomic: TGATGGAAATGGTCTGGGACAGATGATATCGCTCCGCCATCCCAAATCTGgtaatttgaa ... tgtttgacagGAAATGCAACACAATATCTGTTTGTAAATGGAATGCTTCAGGAACTTCAGT
EST: TGATGGAAATGGTCTGGGACAGATGATATCGCTCCGCCATCCCAAATCTG GAAATGCAACACAATATCTGTTTGTAAATGGAATGCTTCAGGAACTTCAGT
genomic: TGATGGAAATGGTCTGGGACAGATGATATCGCTCCGCCATCCCAAATCTGgtaatttgaa ... tgtttgacagGAAATGCAACACAATATCTGTTTGTAAATGGAATGCTTCAGGAACTTCAGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCCTGGTACTGATGGAAATGGTCTGGGACAGATGATATCGCTCCGCCATCCCAAATCTGgtaatttgaagagtatccattactttattacttcttatcgtgttttttgttatttatatttaaatttatataaatatatgatttattgtaattgtctata
- - - - - GATGGA
- - - - - - - - - - - - - - CAGATG