1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AGCATCTTCTGTTTCAAATGGTACTTTTGCTTCAGACTCTCACCCAAGACAGCCTATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAGgttaactttgttgatatctttgtttgcttatggaattcgacataggtggtcaggcattcaaatagttgtgcctttgtttcttttttccttttggttttgagtagcaaaaatttaagttttggcatttcctgatagtttttactttttacactttcag
species | Glycine max |
transcript | GLYMA06G07190.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGCCTATTAAGAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAG CACCCTGGAAAGTCTAACGCAGCACATTCTGAAGAATCAATEST: gi|213593270|gb|DB966095.1|DB966095
genomic: AGCCTATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAGgttaactttg ... acactttcagCACCCTGGAAAGTCTAACGCAGCACATTCTGAAGAATCAAT
EST: AGCCTATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAG CACCCTGGAAAGTCTAACEST: gi|18848650|gb|BM567782.1|BM567782
genomic: AGCCTATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAGgttaactttg ... acactttcagCACCCTGGAAAGTCTAAC
EST: AGCCTATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAG CACCCTGGAAAGTCTAACGCAGCACATTCTGAAGAATCAAT
genomic: AGCCTATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAGgttaactttg ... acactttcagCACCCTGGAAAGTCTAACGCAGCACATTCTGAAGAATCAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCATCTTCTGTTTCAAATGGTACTTTTGCTTCAGACTCTCACCCAAGACAGCCTATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAGgttaactttgttgatatctttgtttgcttatggaattcgacataggtggtcaggcattcaaatagttgtgcctttgtttcttttttccttttggttttgagtagcaaaaatttaagttttggcatttcctgatagtttttactttttacactttcag
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