1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' |
TGGATAACGTCCTGTATGACTGGACAGACTCAACTTCTTCTGATTATTGTGTTTGGAGAGGTGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACTgtgagtaacactattcttaactagttttttttttttggtgtattctttagcgtttagaaggatctcgttttcattgtttttttttttttggcag
species | Glycine max |
transcript | GLYMA06G05900.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTTTGGAGAGGTGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACT CAATCTTTCGGGGTTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAGEST: gi|208229472|gb|GE022876.1|GE022876
genomic: GTTTGGAGAGGTGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACTgtgagtaaca ... tttttggcagCAATCTTTCGGGGTTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAG
EST: GTTTGGAGAGGTGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACT CAATCTTTCGGGGTTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAGEST: gi|213594518|gb|DB973675.1|DB973675
genomic: GTTTGGAGAGGTGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACTgtgagtaaca ... tttttggcagCAATCTTTCGGGGTTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAG
EST: GTTTGGAGAGGTGTTACGTGTGATAATGTCACTTTCAACGTGGGTGCACT CAATCTTTCGGGGTTGAATCTTGAGGGCGAAATTTEST: gi|208332397|gb|GE128662.1|GE128662
genomic: GTTTGGAGAGGTGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACTgtgagtaaca ... tttttggcagCAATCTTTCGGGGTTGAATCTTGAGGGCGAAATTT
EST: GTTTGGAGAGGTGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACT CAATCTTTCGGGGTTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAGEST: gi|193661296|gb|FK607472.1|FK607472
genomic: GTTTGGAGAGGTGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACTgtgagtaaca ... tttttggcagCAATCTTTCGGGGTTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAG
EST: GGAGAGGGGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACT CAATCTTTCGGGGTTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAG
genomic: GGAGAGGTGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACTgtgagtaaca ... tttttggcagCAATCTTTCGGGGTTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGATAACGTCCTGTATGACTGGACAGACTCAACTTCTTCTGATTATTGTGTTTGGAGAGGTGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACTgtgagtaacactattcttaactagttttttttttttggtgtattctttagcgtttagaaggatctcgttttcattgtttttttttttttggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG