1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CATTATCAAAGGGATATTGTCCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaattttggttggtgaaatttcctttgcagttagtttatggaacatagtgtatgccatatatttcatgtgtgcaagagaagaaaaagttgggtgg...
species | Glycine max |
transcript | GLYMA06G01120.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATGG GAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTAEST: gi|9987696|gb|BE661804.1|BE661804
genomic: CCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaatt ... tgtttaacagGAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTA
EST: CCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAG GAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTAEST: gi|193633792|gb|FK582426.1|FK582426
genomic: CCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaatt ... tgtttaacagGAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTA
EST: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAG GAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTAEST: gi|151395558|gb|EV265435.1|EV265435
genomic: CCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaatt ... tgtttaacagGAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTA
EST: CCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAG GAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTAEST: gi|18040044|gb|BM308338.1|BM308338
genomic: CCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaatt ... tgtttaacagGAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTA
EST: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAG GAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTAEST: gi|11688247|gb|BF595923.1|BF595923
genomic: CCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaatt ... tgtttaacagGAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTA
EST: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAT GAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTA
genomic: CCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaatt ... tgtttaacagGAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATTATCAAAGGGATATTGTCCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaattttggttggtgaaatttcctttgcagttagtttatggaacatagtgtatgccatatatttcatgtgtgcaagagaagaaaaagttgggtgg
- - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttgggtg