1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
TATGAAGTATGACCAAATAGCAGAATTGCTGAATGGCATTGCTGAGAGGTTTGACTGGGATAAAGTAATGGAAGGTGATAAAATTATTGGACTCAAACAGgtaagcctgacatttgcatcaacaacatgtctaatattttcttccagtttaattcatttgttaaaattgcaacgttatgtgaaccag
species | Glycine max |
transcript | GLYMA05G37850.3 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGACTGGGATAAAGTAATGGAAGGTGATAAAATTATTGGACTCAAACAG GGGAAGCAGAGCATATCAEST: gi|209707541|gb|BW665000.1|BW665000
genomic: TTGACTGGGATAAAGTAATGGAAGGTGATAAAATTATTGGACTCAAACAGgtaagcctga ... tgtgaaccagGGGAAGCAGAGCATATCA
EST: TTGACTGGGATAAAGTAATGGAAGGTGATAAAATTATTGGACTCAAACAG GGGAAGCAGAGCATATCATTGGAGCCTGEST: gi|209718854|gb|BW669041.1|BW669041
genomic: TTGACTGGGATAAAGTAATGGAAGGTGATAAAATTATTGGACTCAAACAGgtaagcctga ... tgtgaaccagGGGAAGCAGAGCATATCATTGGAGCCTG
EST: TTGACTGGGATAAAGTAATGGAAGGTGATAAAATTATTGGACTCAAACAG GGGAAGCAGAGCATATCATTGGAGCC
genomic: TTGACTGGGATAAAGTAATGGAAGGTGATAAAATTATTGGACTCAAACAGgtaagcctga ... tgtgaaccagGGGAAGCAGAGCATATCATTGGAGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGAAGTATGACCAAATAGCAGAATTGCTGAATGGCATTGCTGAGAGGTTTGACTGGGATAAAGTAATGGAAGGTGATAAAATTATTGGACTCAAACAGgtaagcctgacatttgcatcaacaacatgtctaatattttcttccagtttaattcatttgttaaaattgcaacgttatgtgaaccag
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