1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ACTGCACTTGATGTGGCATCATGGATGTTCAATATAGTCACATCTGTGGGAATAATCCTTGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTGgtatacagtttcttgaccctttcccatccctgataatttactccactttcattttattttcaatgtgcaaatgctcactgcttgcaatgcattcgttgag...
species | Glycine max |
transcript | GLYMA05G31940.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AATAATCCTTGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTG CTACAACGTTAACTGGTCTGCATTTTGCCACAACAACCTTGCTGACAGTCTEST: gi|208198175|gb|GD996806.1|GD996806
genomic: AATAATCCTTGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTGgtatacagtt ... tattatgcagCTACAACGTTAACTGGTCTGCATTTTGCCACAACAACCTTGCTGACAGTCT
EST: AATAAT-CTTGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTG CTACAACGTTAACTGGTCTGCATTTTGCCACAACAACCTTGCTGACAGTCTEST: gi|298180404|gb|HO021957.1|HO021957
genomic: AATAATCCTTGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTGgtatacagtt ... tattatgcagCTACAACGTTAACTGGTCTGCATTTTGCCACAACAACCTTGCTGACAGTCT
EST: AATAATCCTTGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTG CTACAACGTTAACTGGTCTGCATTTTGCCACAACAACCTTGCTGACAGTCT
genomic: AATAATCCTTGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTGgtatacagtt ... tattatgcagCTACAACGTTAACTGGTCTGCATTTTGCCACAACAACCTTGCTGACAGTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTGCACTTGATGTGGCATCATGGATGTTCAATATAGTCACATCTGTGGGAATAATCCTTGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTGgtatacagtttcttgaccctttcccatccctgataatttactccactttcattttattttcaatgtgcaaatgctcactgcttgcaatgcattcgttgag
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