1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CATGGAGCTTAAAATAATGATTGATGCTTGTCGGAGAGCATCCGCCAAGAATATCACTGCTGTGATTCCCTACTTTGGATATGCCAGAGCTGATAGAAAGgcaagtattttggacataactgtttttcttttgtatctttgtaattggtagttttattcaaggagtctacctatgatccacaattgctattgcagacaat...
species | Glycine max |
transcript | GLYMA05G06110.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATATCACTGCTGTGATTCCCTACTTTGGATATGCCAGAGCTGATAGAAAG ACTCAAGGACGTGAATCAATTGCTGCTAAACTTGTTGCGAACCTTATTACAEST: gi|58018515|gb|CX705257.1|CX705257
genomic: ATATCACTGCTGTGATTCCCTACTTTGGATATGCCAGAGCTGATAGAAAGgcaagtattt ... ccctcggcagACTCAAGGACGTGAATCAATTGCTGCTAAACTTGTTGCGAACCTTATTACA
EST: ATATCACTGCTGTGATTCCCTACTTTGGATATGCCAGAGCTGATAGAAAG ACTCAAGGACGTGAATCAATTGCTGCT-AACTTGTTTGCGAACCTTATTAC
genomic: ATATCACTGCTGTGATTCCCTACTTTGGATATGCCAGAGCTGATAGAAAGgcaagtattt ... ccctcggcagACTCAAGGACGTGAATCAATTGCTGCTAAACTTG-TTGCGAACCTTATTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGGAGCTTAAAATAATGATTGATGCTTGTCGGAGAGCATCCGCCAAGAATATCACTGCTGTGATTCCCTACTTTGGATATGCCAGAGCTGATAGAAAGgcaagtattttggacataactgtttttcttttgtatctttgtaattggtagttttattcaaggagtctacctatgatccacaattgctattgcagacaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT