1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CAATGACAAATGAACAGCTAATGGATCATGGGAATCGGATGATGGATGAGACAGATCAAGCCATTGAAAGGGGGAAAAAGgttggcttatttcttgagtattacttcttttaaaatatgcagtgttcaacaaatttgtttatagtttgttattgatttttctagtccaaggaagtaaagg...
species | Glycine max |
transcript | GLYMA05G05720.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GATGGATGAGACAGATCAAGCCATTGAAAGGGGGAAAAAG GTAGTTCAAGACACAATAAATGTTGGTACAGATACTGCAGCAGCTCTTAAGEST: gi|192301656|gb|FG994378.1|FG994378
genomic: GATGGATGAGACAGATCAAGCCATTGAAAGGGGGAAAAAGgttggcttat ... gcattaatagGTAGTTCAAGACACAATAAATGTTGGTACAGATACTGCAGCAGCTCTTAAG
EST: GGAATCGGATGATGGATGAGACAGATCAAGCCATTGAAAGGGGGAAAAAG GTAGTTCAAGACACAATAAATGTTGGTACAGATACTGCAGCAGCTCTTAAGEST: gi|16344307|gb|BI969902.1|BI969902
genomic: GGAATCGGATGATGGATGAGACAGATCAAGCCATTGAAAGGGGGAAAAAGgttggcttat ... gcattaatagGTAGTTCAAGACACAATAAATGTTGGTACAGATACTGCAGCAGCTCTTAAG
EST: TCGGATGATGGATGAGACAGATCAAGCCATTGAAAGGGGGAAAAAG GTAGTTCAAGANNNAATAAATGTTGGTACAGATACTGCAGCAGCTCTTAAG
genomic: TCGGATGATGGATGAGACAGATCAAGCCATTGAAAGGGGGAAAAAGgttggcttat ... gcattaatagGTAGTTCAAGACACAATAAATGTTGGTACAGATACTGCAGCAGCTCTTAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAATGACAAATGAACAGCTAATGGATCATGGGAATCGGATGATGGATGAGACAGATCAAGCCATTGAAAGGGGGAAAAAGgttggcttatttcttgagtattacttcttttaaaatatgcagtgttcaacaaatttgtttatagtttgttattgatttttctagtccaaggaagtaaagg
- - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA