1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CATTATCAAAGGGATATTGTCCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaattttggttggtgaaattttctttgcagttatttatggaatatattgtatgtcatagctttgatatctgtgcaggagaagaaaaaggagggtg...
species | Glycine max |
transcript | GLYMA04G01100.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAG GAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTAEST: gi|18039567|gb|BM307861.1|BM307861
genomic: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaatt ... tatttaacagGAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTA
EST: CCGCGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAG GAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTAEST: gi|298187568|gb|HO034717.1|HO034717
genomic: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaatt ... tatttaacagGAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTA
EST: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAG GAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTAEST: gi|5126412|gb|AI748148.1|AI748148
genomic: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaatt ... tatttaacagGAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTA
EST: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAG GAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTAEST: gi|16347039|gb|BI972634.1|BI972634
genomic: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaatt ... tatttaacagGAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTA
EST: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAG GAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTA
genomic: CCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaatt ... tatttaacagGAACAAAGTTATCAGAAGATAACAGGAAATATGGTGCAGATAATACGTGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATTATCAAAGGGATATTGTCCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGgtcagtaattttggttggtgaaattttctttgcagttatttatggaatatattgtatgtcatagctttgatatctgtgcaggagaagaaaaaggagggtg
- - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG