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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTAACTTCTGATGCCGCAGCCTCCATTTCAATGCGCATCGCAAACAGAGTTCAGAGAATTGTTGGGTTTTGCTACCCGTGGTTACATGCTAGTACTGAGGgtatgtcaaattcaaatacaaattaacatgattttaataattcaattttttttcaaggttatgcattctattctatctgtgacaattatttctttggagtctgaatatccttaaaggtctaaagtatcatatttacaatgcag

Basic information

species Glycine max
transcript GLYMA03G41050.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|11687819|gb|BF595495.1|BF595495
EST:     TCAGAGAATTGTTGGGTTTTGCTACCCGTGGTTACATGCTAGTACTGAGG                         GCTTGCAATTTGCTTACCAACTCTTATACCTGTTGGATGCTACTGGATACT
genomic: TCAGAGAATTGTTGGGTTTTGCTACCCGTGGTTACATGCTAGTACTGAGGgtatgtcaaa ... tacaatgcagGCTTGCAATTTGCTTACCAACTCTTATACCTGTTGGATGCTACTGGATACT
EST: gi|209710153|gb|BW658902.1|BW658902
EST:     TCAGAGAATTGTTGGGTTTTGCTACCCGTGGTTACATGCTAGTACTGAGG                         GCTTGCAATTTGCTTACCAACTCTTATACCTGTTGGATGCTACTGGATACT
genomic: TCAGAGAATTGTTGGGTTTTGCTACCCGTGGTTACATGCTAGTACTGAGGgtatgtcaaa ... tacaatgcagGCTTGCAATTTGCTTACCAACTCTTATACCTGTTGGATGCTACTGGATACT