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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTTCTTTTGGAAGAATTTATTAATAAAATTAATGCCGGTGGAGAAGATGGTGTTTCGCCCATTGTTCTTTCTCCAGATTCTGATAAATCTCATCGAAAGgttagtatgagcttcggggcttattttgatcatttttttttaatctttgttagattcaggaaacatttgtctatattggctagaactttgatactgggtc...

Basic information

species Glycine max
transcript GLYMA03G40600.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208174783|gb|GD972902.1|GD972902
EST:     GTTTCGCCCGTTGTTCTTTCTCCAGATTCTGAATAAAATCTCATCGAAAG                         GCAATGCATAACTTCTTTAAAGGAAAAACTTTAAGTTCCTGGTCACTGATG
genomic: GTTTCGCCCATTGTTCTTTCTCCAGATTCTGA-TAAA-TCTCATCGAAAGgttagtatga ... aatctatcagGCAATGCATAACTTCTTTAA-GGAAAA-CTTTAAGTTCCTGGTCACTGATG
EST: gi|213591850|gb|DB973415.1|DB973415
EST:     GTGTTTCGCCCATTGTTCTTTCTCCAGATTCTGATAAATCTCATCGAAAG                         GCAATGCATAACTTCTTTAAGGAAAACTTTAAGTTCCTGGTCACTGATGTG
genomic: GTGTTTCGCCCATTGTTCTTTCTCCAGATTCTGATAAATCTCATCGAAAGgttagtatga ... aatctatcagGCAATGCATAACTTCTTTAAGGAAAACTTTAAGTTCCTGGTCACTGATGTG