1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTAGgtataaaatgtttttattatttaatgaaaattttgttcagctgataaatttctttgcatgtgcaagaattgctttgtgctatattaaggtcatgccttgataagtgtttttttgtggcccttgaatctag
species | Glycine max |
transcript | GLYMA03G36650.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTAG AACACAAACTCTTCATTGGCATGCTTCCAAAGAATGTTTCTGAAGTTGAAAEST: gi|19348677|gb|BM893209.1|BM893209
genomic: ATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTAGgtataaaatg ... ttgaatctagAACACAAACTCTTCATTGGCATGCTTCCAAAGAATGTTTCTGAAGTTGAAA
EST: ATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTAG AACACAAACTCTTCATTGGCATGCTTCCAAAGAATGTTTCTGAAGTTGAAAEST: gi|298175595|gb|HO018306.1|HO018306
genomic: ATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTAGgtataaaatg ... ttgaatctagAACACAAACTCTTCATTGGCATGCTTCCAAAGAATGTTTCTGAAGTTGAAA
EST: ATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTAG AACACAAACTCTTCATTGGCATGCTTCCAAAGAATGTTTCTGAAGTTGAAAEST: gi|298167101|gb|HO010540.1|HO010540
genomic: ATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTAGgtataaaatg ... ttgaatctagAACACAAACTCTTCATTGGCATGCTTCCAAAGAATGTTTCTGAAGTTGAAA
EST: ATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTAG AACACAAACTCTTCATTGGCATGCTTCCAAAGAATGTTTCTGAAGTTGAAA
genomic: ATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTAGgtataaaatg ... ttgaatctagAACACAAACTCTTCATTGGCATGCTTCCAAAGAATGTTTCTGAAGTTGAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTAGgtataaaatgtttttattatttaatgaaaattttgttcagctgataaatttctttgcatgtgcaagaattgctttgtgctatattaaggtcatgccttgataagtgtttttttgtggcccttgaatctag
- - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - CAGATG