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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTACACTTCTGAAGTATTGGAGATTCAATCTGATGCTCCTACACTGCATGTTCTGTTTGTTCCTGGAAACCCAGgtgtggcctcgattgtgtgttcgcgtgcttatttttccatgttaaatttgtttagctgcggctcttggtacttttggttgttgcag

Basic information

species Glycine max
transcript GLYMA03G35830.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192314238|gb|FK006976.1|FK006976
EST:     TCAATCTGATGCTCCTACACTGCATGTTCTGTTTGTTCCTGGAAACCCAG                         GTGTTATTTTATTCTACAAGGACTTTGTGGAATTTCTATATGAGTTGCTGG
genomic: TCAATCTGATGCTCCTACACTGCATGTTCTGTTTGTTCCTGGAAACCCAGgtgtggcctc ... gttgttgcagGTGTTATTTTATTCTACAAGGACTTTGTGGAATTTCTATATGAGTTGCTGG
EST: gi|192314239|gb|FK006977.1|FK006977
EST:     TCAATCTGATGCTCCTACACTGCATGTTCTGTTTGTTCCTGGAAACCCAG                         GTGTTATTTTATTCTACAAGGACTTTGTGGAATTTCTATATGAGTTGCTGG
genomic: TCAATCTGATGCTCCTACACTGCATGTTCTGTTTGTTCCTGGAAACCCAGgtgtggcctc ... gttgttgcagGTGTTATTTTATTCTACAAGGACTTTGTGGAATTTCTATATGAGTTGCTGG
EST: gi|6134681|gb|AW133074.1|AW133074
EST:     TCAATCTGATGCTTCTACACTGCATGTTCTGTTTGTTCCTGGAAACCCAG                         GTGTTATTTTATTCTACAAGGACTTTGTGGAATTTCTATATGAGTTGCTGG
genomic: TCAATCTGATGCTCCTACACTGCATGTTCTGTTTGTTCCTGGAAACCCAGgtgtggcctc ... gttgttgcagGTGTTATTTTATTCTACAAGGACTTTGTGGAATTTCTATATGAGTTGCTGG
EST: gi|151395111|gb|EV264982.1|EV264982
EST:     TCAATCTGATGCTCCTACACTGCATGTTCTGTTTGTTCCTGGAAACCCAG                         GTGTTATTTTATTCTACAAGGACTTTGTGGAATTTCTATATGAGTTGCTGG
genomic: TCAATCTGATGCTCCTACACTGCATGTTCTGTTTGTTCCTGGAAACCCAGgtgtggcctc ... gttgttgcagGTGTTATTTTATTCTACAAGGACTTTGTGGAATTTCTATATGAGTTGCTGG