1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTGGGCAGGAAAGGTTCAGGACTCTAAACAGTTCCTACTATAGAAAAGCACAAGGAATCATTCTCGgtatgctgactttatttgtgtacacaagaatgtaggattatttgattcatccacaacagaaactttctctagaatttctttagggagaaatttgtgtttg...
species | Glycine max |
transcript | GLYMA03G34330.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATAGAAAAGCACAAGGAATCATTCTCG TTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTATCAGAAGTGTGGTEST: gi|208268223|gb|GE069344.1|GE069344
genomic: ATAGAAAAGCACAAGGAATCATTCTCGgtatgctgac ... tcacttctagTTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTATCAGAAGTGTGGT
EST: ATAGAAAAGCACAAGGAATCATTCTCG TTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTATCAGAAGTGTGGTEST: gi|151401317|gb|EV271131.1|EV271131
genomic: ATAGAAAAGCACAAGGAATCATTCTCGgtatgctgac ... tcacttctagTTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTATCAGAAGTGTGGT
EST: CAGGACTCTAAACAGTTCTTACTATAGAAAAGCACAAGGAATCATTCTCG TTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTATCAGAAGTGTGGTEST: gi|192295047|gb|FG986766.1|FG986766
genomic: CAGGACTCTAAACAGTTCCTACTATAGAAAAGCACAAGGAATCATTCTCGgtatgctgac ... tcacttctagTTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTATCAGAAGTGTGGT
EST: CAGGACTCTAAACAGTTCCTACTATAGAAAAGCACAAGGAATCATTCTCG TTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTATCAGAAGTGTGGTEST: gi|208223016|gb|GE027551.1|GE027551
genomic: CAGGACTCTAAACAGTTCCTACTATAGAAAAGCACAAGGAATCATTCTCGgtatgctgac ... tcacttctagTTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTATCAGAAGTGTGGT
EST: ATAGAAAAGCACAAGGAATCATTCTCG TTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTATCAGAAGTGTGGT
genomic: ATAGAAAAGCACAAGGAATCATTCTCGgtatgctgac ... tcacttctagTTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTATCAGAAGTGTGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGGGCAGGAAAGGTTCAGGACTCTAAACAGTTCCTACTATAGAAAAGCACAAGGAATCATTCTCGgtatgctgactttatttgtgtacacaagaatgtaggattatttgattcatccacaacagaaactttctctagaatttctttagggagaaatttgtgtttg
- - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aacagaaa