Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAAAAATTCGAATTGCTCTCTACGTTCAAAAGGCAGCATTACAATTTATTGATGgtacggtgatccaatttcaaaattcaaagttcttatcattctttagaactaatcactttctcttcatatgttttctaagctgatctggttttcttatgcag

Basic information

species Glycine max
transcript GLYMA03G29010.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G29010.1 (Glycine max), 5'ss of exon 3
lower sequence: Vv08s0007g08960.t01 (Vitis vinifera), 5'ss of exon 2
GAAAAAATTCGAATTGCTCTCTACGTTCAAAAGGCAGCATTACAATTTATTGATGgtacggtgatccaatttcaaaattcaaagttcttatcattctttagaactaatcactttctcttcatatgttttctaagctgatctggttttcttatgcag
|||||||||||| ||||||| || ||||||||||| ||| | || ||||||||||||| |    |||  |       ||||  |   | ||  |||||         ||| ||||| |   | |  | ||| || | |   | || | || |||||
GAAAAAATTCGAGTTGCTCTTTATGTTCAAAAGGCGGCACTGCAGTTTATTGATGgtatgagcttcctgtgatttggttcactgaaatcatatttctt--------gtcaatttct-tctgtttcctgtctcagataa---gtttgtgttttgcag