1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TATGGAGCTTCTCATAATGATTGATGCCTGCAGGAGGGCTTCAGCCAAAAATATTACTGCTGTCATTCCATATTTTGGATATGCCAGAGCTGATAGAAAGgtctgtttgtcagcttacatatgcatttatatttattatttctgatgaagttttgtccttcttattccaccatattctccccaggcttgtcttgtaattg...
species | Glycine max |
transcript | GLYMA03G24280.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATATTACTGCTGTCATTCCATATTTTGGATATGCCAGAGCTGATAGAAAG ACCCAAGGACGTGAATCCATTGCTGCCAAGCTTGTAGCAAATTTAATTACAEST: gi|11413392|gb|BF425403.1|BF425403
genomic: ATATTACTGCTGTCATTCCATATTTTGGATATGCCAGAGCTGATAGAAAGgtctgtttgt ... actgtttcagACCCAAGGACGTGAATCCATTGCTGCCAAGCTTGTAGCAAATTTAATTACA
EST: ATATTACTGCTGGCATTCCATATAGTGGATGTGCCAGAGCTGATAGAAAA ACCCAAGGA-GTGAATCCATTGCTGGCAAGCTTGEST: gi|6566864|gb|AW234496.1|AW234496
genomic: ATATTACTGCTGTCATTCCATATTTTGGATATGCCAGAGCTGATAGAAAGgtctgtttgt ... actgtttcagACCCAAGGACGTGAATCCATTGCTGCCAAGCTTG
EST: ATATTACTGCTGTCATTCCATATTTTGGATATGCCAGAGCTGATAGAAAG ACCCAAGGACGTGAATCCATTGCTGCCAAGCTTGTAGCAAATTTAATTACA
genomic: ATATTACTGCTGTCATTCCATATTTTGGATATGCCAGAGCTGATAGAAAGgtctgtttgt ... actgtttcagACCCAAGGACGTGAATCCATTGCTGCCAAGCTTGTAGCAAATTTAATTACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGGAGCTTCTCATAATGATTGATGCCTGCAGGAGGGCTTCAGCCAAAAATATTACTGCTGTCATTCCATATTTTGGATATGCCAGAGCTGATAGAAAGgtctgtttgtcagcttacatatgcatttatatttattatttctgatgaagttttgtccttcttattccaccatattctccccaggcttgtcttgtaattg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT