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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCATGACCACTAGACCTAGGTCAGATCTTTATGTCAACCTGCCAGCTTTGAGGAAATTAGATAACATGCTTCTGgtaagattttacaccattcagtgtacattagtccagtttcaagaaatagcacatactaaacattctctcttctttccaaag

Basic information

species Glycine max
transcript GLYMA03G16610.2
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G16610.2 (Glycine max), 5'ss of exon 3
lower sequence: AT5G02010.1 (Arabidopsis thaliana), 5'ss of exon 4
GTCATGACCACTAGACCTAGGTCAGATCTTTATGTCAACCTGCCAGCTTTGAGGAAATTAGATAACATGCTTCTGgtaaga-----------ttttacaccattcagtgtacattagtccagtttcaagaaatag----cacatactaaacattctctcttctttccaaag
 | |||||    ||||| || |||||||||||||| ||||| |||||| | |||||| |||||||||||||||| ||||||            ||| |  | | |    | |  ||      ||| ||| |  |     | ||| || |    |||  | ||||| ||   
ATAATGACTTGCAGACCAAGATCAGATCTTTATGTTAACCTCCCAGCTCTCAGGAAACTAGATAACATGCTTCTTgtaagaacaagtgatctcttttcgtcttcccagtttctctataggtattttaagcagcaaaggtctcattcttattcatcttccatctttgcag--