Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGGCGCTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTCAACTGTGTCGGGGCTCTAAATTACAAATATTTCCTTCTTTTCTTGgtatggacgccttagctgaagttattgttttattatctagttattagttgtgtgaattgtattatttctggcttacaatgattttatttgatgtctctga...

Basic information

species Glycine max
transcript GLYMA03G02930.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192301934|gb|FG995552.1|FG995552
EST:     TAGTCAACTGTGTCGGGGCTCTAAATTACAAATATTTCCTTCTTTTCTTG                         TTCTACACTTTTCTTGAGACGACTCTAGTGACTGCATCCTTGCTGCCTCAT
genomic: TAGTCAACTGTGTCGGGGCTCTAAATTACAAATATTTCCTTCTTTTCTTGgtatggacgc ... cttggtgcagTTCTACACTTTTCTTGAGACGACTCTAGTGACTGCATCCTTGCTGCCTCAT
EST: gi|27424346|gb|CA935866.1|CA935866
EST:     TAGTCAACTGTGTCGGGGCTCTAAATTACAAATATTTCCTTCTTTTCTTG                         TTCTACACTTTTCTTGAGACGACTCTAGTGACTGCATCCTTGCTGCCTCAT
genomic: TAGTCAACTGTGTCGGGGCTCTAAATTACAAATATTTCCTTCTTTTCTTGgtatggacgc ... cttggtgcagTTCTACACTTTTCTTGAGACGACTCTAGTGACTGCATCCTTGCTGCCTCAT
EST: gi|151408618|gb|EV278426.1|EV278426
EST:     TAGTCAACTGTGTCGGGGCTCTAAATTACAAATATTTCCTTCTTTTCTTG                         TTCTACACTTTTCTTGAGACGACTCTAGTGACTGCATCCTTGCTGCCTCAT
genomic: TAGTCAACTGTGTCGGGGCTCTAAATTACAAATATTTCCTTCTTTTCTTGgtatggacgc ... cttggtgcagTTCTACACTTTTCTTGAGACGACTCTAGTGACTGCATCCTTGCTGCCTCAT