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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGACCCTGTTGATGGATCTGACTCCCAATTGGAAGTCTCCAATGATGCATCTGATGTTTCAACTATTGAGCAACGCCGGGCTTATAAACTGGAACTCCAGgtaaacaaatgaacaaggttttgagaataaagtatatctttgctctag

Basic information

species Glycine max
transcript GLYMA03G02610.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G02610.1 (Glycine max), 5'ss of exon 3
lower sequence: Vv15s0048g00800.t01 (Vitis vinifera), 5'ss of exon 3
AGACCCTGTTGATGGATCTGACTCCCAATTGGAAGTCTCCAATGATGCATCTGATGTTTCAACTATTGAGCAACGCCGGGCTTATAAACTGGAACTCCAGgtaaacaaatgaacaaggttttgagaataa--agta-tatctt-tgctctag--------------------------------------------
 || ||||  || |||||||| || || |  ||||  ||   ||| |  |||||||||||||| ||||||||||| |||||||| || || ||||| ||||||||   | |  |||  ||||| |   ||  |||| |||||| || |||                                              
TGAGCCTGCCGAAGGATCTGATTCTCATTCTGAAGCTTCAGGTGAAGTTTCTGATGTTTCAACAATTGAGCAACGACGGGCTTACAAGCTCGAACTTCAGgtaaatgcaagg-caaccttttgggtgcaagcagtactatcttctgttctttcaattacccagttctcatggaatctaatgtaaaattcctggcag