1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
AGTATTCGCCCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAGgtatgtattattgttctcatctctaatctcttcatctcttactatcaaatatcaaactggccattgttgtttcgatgcag
species | Glycine max |
transcript | GLYMA02G46380.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTCGCCCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAG ATTACTGTCAGGGAGGCTCTGAACTCCGCACTCGATGAGGAAATGTCAGCTEST: gi|213617892|gb|DB957373.1|DB957373
genomic: TTCGCCCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAGgtatgtatta ... ttcgatgcagATTACTGTCAGGGAGGCTCTGAACTCCGCACTCGATGAGGAAATGTCAGCT
EST: TTCGCCCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAG ATTACTGTCAGGGAGGCTCTGAACTCCGCACTCGATGAGGAAATGTCAGCTEST: gi|4292147|gb|AI441863.1|AI441863
genomic: TTCGCCCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAGgtatgtatta ... ttcgatgcagATTACTGTCAGGGAGGCTCTGAACTCCGCACTCGATGAGGAAATGTCAGCT
EST: CCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAG ATTACTGTCAGGGAGGCTCTGAACTCCGCACTCGATGAGGAAATGTCAGCTEST: gi|8826851|gb|BE210581.1|BE210581
genomic: CCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAGgtatgtatta ... ttcgatgcagATTACTGTCAGGGAGGCTCTGAACTCCGCACTCGATGAGGAAATGTCAGCT
EST: TTCGCCCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAG ATTACTGTCAGGGAGGCTCTGAACTCCGCACTCGATGAGGAAATGTCAGCTEST: gi|209708509|gb|BW668119.1|BW668119
genomic: TTCGCCCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAGgtatgtatta ... ttcgatgcagATTACTGTCAGGGAGGCTCTGAACTCCGCACTCGATGAGGAAATGTCAGCT
EST: TTCGCCCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAG ATTACTGTCAGGGAGGCTCTGAACTCCGCACTCGATGAGGAAATGTCAGCT
genomic: TTCGCCCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAGgtatgtatta ... ttcgatgcagATTACTGTCAGGGAGGCTCTGAACTCCGCACTCGATGAGGAAATGTCAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTATTCGCCCTGCCTTCTCCGCAATCAGACACTTGTCTTCTGCAGCTAAAGAGgtatgtattattgttctcatctctaatctcttcatctcttactatcaaatatcaaactggccattgttgtttcgatgcag
- - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - GCAGCT