1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GGCGCTTGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCACAGACAGgtattgtattttctgttttaccttcccaccctcttttggcatagcaggtgcagcgtgtactttgtgtattgttcatgtgtttgtgtctggcatcagcctt...
species | Glycine max |
transcript | GLYMA02G46300.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCACAGACAG GTTATCCACACGGAAGCATATGTTGGTAAGCCGAAAGTGAAATCTGCTGCTEST: gi|151398595|gb|EV268466.1|EV268466
genomic: TGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCACAGACAGgtattgtatt ... tttgtttcagGTTATCCACACGGAAGCATATGTTGGTAAGCCGAAAGTGAAATCTGCTGCT
EST: TGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCACAGACAG GTTATCCACACGGAAGCATATGTTGGTAAGCCGAAAGTGAAATCTGCTGCTEST: gi|208058183|gb|GD859782.1|GD859782
genomic: TGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCACAGACAGgtattgtatt ... tttgtttcagGTTATCCACACGGAAGCATATGTTGGTAAGCCGAAAGTGAAATCTGCTGCT
EST: TGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCACAGACAG GTTATCCACACGGAAGCATATGTTGGTAAGCCGAAAGTGAAATCTGCTGCTEST: gi|208322368|gb|GE122577.1|GE122577
genomic: TGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCACAGACAGgtattgtatt ... tttgtttcagGTTATCCACACGGAAGCATATGTTGGTAAGCCGAAAGTGAAATCTGCTGCT
EST: TGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCGCAGACAG GTTATCCACACGGAAGCATATGTTGGTAAGCCGAAAGTGAAATCTGCTGCTEST: gi|9899477|gb|BE608445.1|BE608445
genomic: TGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCACAGACAGgtattgtatt ... tttgtttcagGTTATCCACACGGAAGCATATGTTGGTAAGCCGAAAGTGAAATCTGCTGCT
EST: TGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCACAGACAG GTTATCCACACGGAAGCATATGTTGGTAAGCCGAAAGTGAAATCTGCTGCT
genomic: TGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCACAGACAGgtattgtatt ... tttgtttcagGTTATCCACACGGAAGCATATGTTGGTAAGCCGAAAGTGAAATCTGCTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCGCTTGGGAGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCACAGACAGgtattgtattttctgttttaccttcccaccctcttttggcatagcaggtgcagcgtgtactttgtgtattgttcatgtgtttgtgtctggcatcagcctt
- - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cccaccc