1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATTGAGGAGTGATGGAGAGCGAGAGTTCATGTTTTATCGTAATCCCAGTGCTGATATGCTGCTCCAAGAAGATGAACTTGATTTGGACCTAATCAGAAAGgtaaaaacaaaagcagaatttgtggtagtcaaactaaagcaaaatgtatgccataatccatgagttaatcgaagggaaatcagaccactattgagccaca...
species | Glycine max |
transcript | GLYMA02G41320.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTGATATGCTGCTCCAAGAAGATGAACTTGATTTGGACCTAATCAGAAAG GCCAAGATCTTCCATTATGGTTCTATAAGTCTTATAACAGAACCATGEST: gi|151410272|gb|EV280087.1|EV280087
genomic: CTGATATGCTGCTCCAAGAAGATGAACTTGATTTGGACCTAATCAGAAAGgtaaaaacaa ... tttctggcagGCCAAGATCTTCCATTATGGTTCTATAAGTCTTATAACAGAACCATG
EST: CTGATATGCTGCTCCAAGAAGATGAACTTGATTTGGACCTAATCAGAAAG GCCAAGATCTTCCATTATGGTTCTATAAGTCTTATAACAGA-CCATGCAAA
genomic: CTGATATGCTGCTCCAAGAAGATGAACTTGATTTGGACCTAATCAGAAAGgtaaaaacaa ... tttctggcagGCCAAGATCTTCCATTATGGTTCTATAAGTCTTATAACAGAACCATGCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGAGGAGTGATGGAGAGCGAGAGTTCATGTTTTATCGTAATCCCAGTGCTGATATGCTGCTCCAAGAAGATGAACTTGATTTGGACCTAATCAGAAAGgtaaaaacaaaagcagaatttgtggtagtcaaactaaagcaaaatgtatgccataatccatgagttaatcgaagggaaatcagaccactattgagccaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG