1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAGAATTAGCCACAGAACTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCAgtatgtgattaattgcttctcctatagttgttcttgattcaattacattttatttatttggtaggtccaagaaaaaagggaatctttatgcttcctgaggctgttcttgaacatggctcttttttatgtgtcattatcttag
species | Glycine max |
transcript | GLYMA02G39230.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACCATCAAACCCATGGACACATTGAGAAGGATGAGTCATGGGTTCCA TTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGAEST: gi|151393687|gb|EV263562.1|EV263562
genomic: ACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCAgtatgtgatt ... attatcttagTTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGA
EST: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCA TTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGAEST: gi|151407473|gb|EV277288.1|EV277288
genomic: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCAgtatgtgatt ... attatcttagTTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGA
EST: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCA TTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGAEST: gi|192305128|gb|FG994678.1|FG994678
genomic: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCAgtatgtgatt ... attatcttagTTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGA
EST: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCA TTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGAEST: gi|46492770|gb|CN472326.1|CN472326
genomic: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCAgtatgtgatt ... attatcttagTTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGA
EST: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCA TTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGAEST: gi|151394272|gb|EV264143.1|EV264143
genomic: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCAgtatgtgatt ... attatcttagTTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGA
EST: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCA TTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGAEST: gi|213600296|gb|DB955878.1|DB955878
genomic: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCAgtatgtgatt ... attatcttagTTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGA
EST: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCA TTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGA
genomic: CTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCAgtatgtgatt ... attatcttagTTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGAATTAGCCACAGAACTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCAgtatgtgattaattgcttctcctatagttgttcttgattcaattacattttatttatttggtaggtccaagaaaaaagggaatctttatgcttcctgaggctgttcttgaacatggctcttttttatgtgtcattatcttag
- - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - AGGATG