1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CTCCTCGCCGTCTTTGTTTATTCAATACAACCACTGGAGCTGCTCTTAGAGAATTGAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAGgtcaaacctcccatcttcactagtgcacttttcttctttttagtttagtctcggtttaggtttaccaatgcttccttattaaaatgttaaacaacattac...
species | Glycine max |
transcript | GLYMA02G36960.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GAATTGAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAG ACTCATTGTCATTTTACAAGACAAAGCATATATATATGAAATAAATAGTCTEST: gi|15284959|gb|BI468850.1|BI468850
genomic: GAATTGAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAGgtcaaacctc ... tataatgcagACTCATTGTCATTTTACAAGACAAAGCATATATATATGAAATAAATAGTCT
EST: GAATTGAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAG ACTCATTGTCATTTTACAAGACAAAGCATATATATATGAAATAAATAGTCTEST: gi|207690947|gb|GD671569.1|GD671569
genomic: GAATTGAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAGgtcaaacctc ... tataatgcagACTCATTGTCATTTTACAAGACAAAGCATATATATATGAAATAAATAGTCT
EST: GAATTGAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAG ACTCATTGTCATTTTACAAGACAAAGCATATATATATGAAATAAATAGTCTEST: gi|193438789|gb|FK407078.1|FK407078
genomic: GAATTGAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAGgtcaaacctc ... tataatgcagACTCATTGTCATTTTACAAGACAAAGCATATATATATGAAATAAATAGTCT
EST: GAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAG ACTCATTGTCATTTTACAAGACAAAGCATATATATATGAAATAAATAGTCTEST: gi|193493227|gb|FK460033.1|FK460033
genomic: GAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAGgtcaaacctc ... tataatgcagACTCATTGTCATTTTACAAGACAAAGCATATATATATGAAATAAATAGTCT
EST: TTGAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAG ACTCATTGTCATTTTACAAGACAAAGCATATATATATGAAATAAATAGTCT
genomic: TTGAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAGgtcaaacctc ... tataatgcagACTCATTGTCATTTTACAAGACAAAGCATATATATATGAAATAAATAGTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCCTCGCCGTCTTTGTTTATTCAATACAACCACTGGAGCTGCTCTTAGAGAATTGAATTTTCTAACTTCCATACTTGCTGTTCGCATGAATAGACAAAGgtcaaacctcccatcttcactagtgcacttttcttctttttagtttagtctcggtttaggtttaccaatgcttccttattaaaatgttaaacaacattac
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