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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAATATCTCAAGTCATGATTTCGAGAAAACGgtaagttcgcgatttaacgttgtaattcgtggtattgatgtttttaggtgtagacatctactccaatttcactgtgtagattagtatattgttgtcattt...

Basic information

species Glycine max
transcript GLYMA02G33320.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193311596|gb|FK278082.1|FK278082
EST:     GGAATATCTCAAGTCATGATTTCGAGAAAACG                         TTGAAGAAGAT
genomic: GGAATATCTCAAGTCATGATTTCGAGAAAACGgtaagttcgc ... gttgttgcagTTGAAGAAGAT
EST: gi|193472539|gb|FK434924.1|FK434924
EST:     GGAATATCTCAAGTCATGATTTCGAGAAAACG                         TTGAAGAAGATGTGTAAAGAAGGTG
genomic: GGAATATCTCAAGTCATGATTTCGAGAAAACGgtaagttcgc ... gttgttgcagTTGAAGAAGATGTGTAAAGAAGGTG
EST: gi|193547133|gb|FK502428.1|FK502428
EST:     GGAATATCTCAAGTCATGATTTCGAGAAAACG                         TTGAAGAAGATGTGTAAAGAAGGTGTATATTGGG
genomic: GGAATATCTCAAGTCATGATTTCGAGAAAACGgtaagttcgc ... gttgttgcagTTGAAGAAGATGTGTAAAGAAGGTGTATATTGGG
EST: gi|193370158|gb|FK336734.1|FK336734
EST:     GGAATATCTCAAGTCATGATTTCGAGAAAACG                         TTGAAGAAGAT
genomic: GGAATATCTCAAGTCATGATTTCGAGAAAACGgtaagttcgc ... gttgttgcagTTGAAGAAGAT
EST: gi|193721750|gb|FK658234.1|FK658234
EST:     GGAATATCTCAAGTCATGATTTCGAGAAAACG                         TTGAAGAAGATGTGTAAAGAAGGTGTA
genomic: GGAATATCTCAAGTCATGATTTCGAGAAAACGgtaagttcgc ... gttgttgcagTTGAAGAAGATGTGTAAAGAAGGTGTA