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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCCAAGTATTCACAGATCCTGAAACCTTTCATTCAATGGgtaagtctcttgtactatgcatttagtgctaggctcacccccctccccccaattttcgttcgtcttgaattctgattctgtctagaattttccag

Basic information

species Glycine max
transcript GLYMA02G31320.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19348278|gb|BM892810.1|BM892810
EST:     GTCCAAGTATTCACAGATCCTGAAACCTTTCATTCAATGG                         GTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGC
genomic: GTCCAAGTATTCACAGATCCTGAAACCTTTCATTCAATGGgtaagtctct ... aattttccagGTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGC
EST: gi|13791554|gb|BG654145.1|BG654145
EST:     GTCCAAGTATTCACAGATCCTGAAACCTTTCATTCAATGG                         GTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGC
genomic: GTCCAAGTATTCACAGATCCTGAAACCTTTCATTCAATGGgtaagtctct ... aattttccagGTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGC