1 5' 3' | 2 5' 3' | 3 5' 3' |
ATATGGAAATGCAACTGTGGTGGAGAACACAGAGAGGGGATGGCGGGATCTCATTTTCCAAAGGATACGGACTGCgtttggttttggaatttgagcttttcctcatactatttatgtgttgtacaattttattttttcttaaggaattttgttttcttttcag
species | Glycine max |
transcript | GLYMA02G28830.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GCGGGATCTCATTTTCCAAAGGATACGGACTGC CAAGGAAAGATTATTGGATTGGCAATTTCTTGTGAAAGACGAAGTGTCTCAEST: gi|193698827|gb|FK634998.1|FK634998
genomic: GCGGGATCTCATTTTCCAAAGGATACGGACTGCgtttggtttt ... ttcttttcagCAAGGAAAGATTATTGGATTGGCAATTTCTTGTGAAAGACGAAGTGTCTCA
EST: GGCGGGATCTCATTTTCCAAAGGAATACGGACTGC CAAGGAAAGATTATTGGATEST: gi|207716151|gb|GD698843.1|GD698843
genomic: GGCGGGATCTCATTTTCCAAAGG-ATACGGACTGCgtttggtttt ... ttcttttcagCAAGGAAAGATTATTGGAT
EST: GGCGGGATCTCATTTTCCAAAGGATACGGACTGC CAAGGAAAGATTATTGGATTGGCAATTTCTTGTGAAAGACGAAGTGTCTCA
genomic: GGCGGGATCTCATTTTCCAAAGGATACGGACTGCgtttggtttt ... ttcttttcagCAAGGAAAGATTATTGGATTGGCAATTTCTTGTGAAAGACGAAGTGTCTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATGGAAATGCAACTGTGGTGGAGAACACAGAGAGGGGATGGCGGGATCTCATTTTCCAAAGGATACGGACTGCgtttggttttggaatttgagcttttcctcatactatttatgtgttgtacaattttattttttcttaaggaattttgttttcttttcag
- - - - - - - - - - - - - - - GAGAGG