1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GAGGAGAAAGGAGACGCTCAGAGAAAGCAACGCAGGTGCTGGTCACAAGAATTGCACAAGAGATTCTTGCATGCACTTCAACAACTTGGGGGTGCAGATTgtgagtatctaattagtttgcacaagttgtttttatgtgctctaaattatgcaattgtaaccaacaacacttttgacacaagtcgtttagatttctttcc...
species | Glycine max |
transcript | GLYMA02G10940.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATTGCACAAGAGATTCTTGCATGCACTTCAACAACTTGGGGGTGCAGATT TTGCCACGCCCAAACAAACCAGGGAATTAATGAAGGTTGATGGCCTCACCAEST: gi|15199474|gb|BI423849.1|BI423849
genomic: ATTGCACAAGAGATTCTTGCATGCACTTCAACAACTTGGGGGTGCAGATTgtgagtatct ... ttgtctgtagCTGCCACGCCCAAACAAATCAGGGAATTAATGAAGGTTGATGGCCTCACCA
EST: ATTGCACAAGAGATTCTTGCATGCACTTCAACAACTTGGGGGTGCAGATT CTGCCACGCCCAAACAAATCAGGGAATTAATGAAGGTTGATGGCCTCACCAEST: gi|254346076|gb|GR859689.1|GR859689
genomic: ATTGCACAAGAGATTCTTGCATGCACTTCAACAACTTGGGGGTGCAGATTgtgagtatct ... ttgtctgtagCTGCCACGCCCAAACAAATCAGGGAATTAATGAAGGTTGATGGCCTCACCA
EST: ATTGCACAAGAGATTCTTGCATGCACTTCAACAACTTGGGGGTGCAGATT CTGCCACGCCCAAACAAATCAGGGAATTAATGAAGGTTGATGGCCTCACCA
genomic: ATTGCACAAGAGATTCTTGCATGCACTTCAACAACTTGGGGGTGCAGATTgtgagtatct ... ttgtctgtagCTGCCACGCCCAAACAAATCAGGGAATTAATGAAGGTTGATGGCCTCACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGAGAAAGGAGACGCTCAGAGAAAGCAACGCAGGTGCTGGTCACAAGAATTGCACAAGAGATTCTTGCATGCACTTCAACAACTTGGGGGTGCAGATTgtgagtatctaattagtttgcacaagttgtttttatgtgctctaaattatgcaattgtaaccaacaacacttttgacacaagtcgtttagatttctttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT