1 5' 3' | 2 5' 3' | 3 5' 3' |
GATGCCATGGTCGATGAAGAAAATTGTGTTTTCTTCCTTCCACATCGTCCAAGGAGCCGAATTAATGAACCTCCTTTTTTCCTTTTCATGAAAGGAACAGgtaatggagagcaaaatattttaatagatatggccatttttgctcaagctttcagcagtagtttgttttctctattttttcctttaatttttattttattttaatgaaatttctaagcgaatttccacatacag
species | Glycine max |
transcript | GLYMA02G10730.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AAGGAGCCGAATTAATGAACCTCCTTTTTTCCTTTTCATGAAAGGAACAT GTTGGTGCGGTGCTGGAGCTGACCACTATGAGCCCCTGATTGCTCATCCTTEST: gi|298194773|gb|HO043245.1|HO043245
genomic: AAGGAGCCGAATTAATGAACCTCCTTTTTTCCTTTTCATGAAAGGAACAGgtaatggaga ... ccacatacagGTTGGTGCGGTGCTGGAGCTGACCACTATGAGCCCCTGATTGCTCATCCTT
EST: AAGGAGCCGAATTACTGAACCTCCATTTTTCCTTTTCATGAAAGGAACAG GTTGGTGCGGTGCTGGAGCTGACCACTATGAGCCCCTCATTGCTCATCCTTEST: gi|207764932|gb|GD735373.1|GD735373
genomic: AAGGAGCCGAATTAATGAACCTCCTTTTTTCCTTTTCATGAAAGGAACAGgtaatggaga ... ccacatacagGTTGGTGCGGTGCTGGAGCTGACCACTATGAGCCCCTGATTGCTCATCCTT
EST: AAGGAGCCGAATTAATGAACCTCCTTTTTTCCTTTTCATGAAAGGAACAG GTTGGTGCGGTGCTGGAGCTGACCACTATGAGCCCCTGATTGCTCATCCTT
genomic: AAGGAGCCGAATTAATGAACCTCCTTTTTTCCTTTTCATGAAAGGAACAGgtaatggaga ... ccacatacagGTTGGTGCGGTGCTGGAGCTGACCACTATGAGCCCCTGATTGCTCATCCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGCCATGGTCGATGAAGAAAATTGTGTTTTCTTCCTTCCACATCGTCCAAGGAGCCGAATTAATGAACCTCCTTTTTTCCTTTTCATGAAAGGAACAGgtaatggagagcaaaatattttaatagatatggccatttttgctcaagctttcagcagtagtttgttttctctattttttcctttaatttttattttattttaatgaaatttctaagcgaatttccacatacag
- - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA