1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CCTGGTTCAAGGGATGGAACCATCCAGTGTTTCATCAAGAGAGACAAATCTAATCTGACATACCACCTATTCCTTTGTCTTAGTCCTGgtaagcacagtttttttgacacccacatgagttgttgcctttttcgtgattgatttgaatttattttttatgtaatttaatagctgatggcatgtaatgt...
species | Glycine max |
transcript | GLYMA02G09030.3 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GAGAGACAAATCTAATCTGACATACCACCTATTCCTTTGTCTTAGTCCTG CATTGCTAGTTGAAAATGGAAAGTTTCTTCTTTCTGCAAAACGGACCAGAAEST: gi|209724879|gb|BW669568.1|BW669568
genomic: GAGAGACAAATCTAATCTGACATACCACCTATTCCTTTGTCTTAGTCCTGgtaagcacag ... gttcatgcagCATTGCTAGTTGAAAATGGAAAGTTTCTTCTTTCTGCAAAACGGACCAGAA
EST: GAGAGACAAATCTAATCTGACATACCACCTATTCCTTTGTCTTAGTCCTG CATTGCTAGTTGAAAATGGAAAGTTTCTTCTTTCTGCAAAACGGACCEST: gi|213597878|gb|DB958259.1|DB958259
genomic: GAGAGACAAATCTAATCTGACATACCACCTATTCCTTTGTCTTAGTCCTGgtaagcacag ... gttcatgcagCATTGCTAGTTGAAAATGGAAAGTTTCTTCTTTCTGCAAAACGGACC
EST: GAGAGACAAATCTAATCTGACATACCACCTATTCCTTTGTCTTAGTCCTG CATTGCTAGTTGAAAATG
genomic: GAGAGACAAATCTAATCTGACATACCACCTATTCCTTTGTCTTAGTCCTGgtaagcacag ... gttcatgcagCATTGCTAGTTGAAAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTGGTTCAAGGGATGGAACCATCCAGTGTTTCATCAAGAGAGACAAATCTAATCTGACATACCACCTATTCCTTTGTCTTAGTCCTGgtaagcacagtttttttgacacccacatgagttgttgcctttttcgtgattgatttgaatttattttttatgtaatttaatagctgatggcatgtaatgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cacccac