1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
AGACTATGGGTCAATAAATGAAAACGTGAAGAAGAGTCAATATGCTGTCAGAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAGgtgggttataagttattttccaggtcatttacaaaatgttatatttgtttgacttacacgttgcaccctttggttggaggaatacattgatcttgataaa...
species | Glycine max |
transcript | GLYMA02G04320.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAG ATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTGEST: gi|20497810|gb|BQ272740.1|BQ272740
genomic: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAGgtgggttata ... ttgttggcagATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTG
EST: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAG ATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTGEST: gi|120531769|gb|EH259902.1|EH259902
genomic: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAGgtgggttata ... ttgttggcagATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTG
EST: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAG ATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTGEST: gi|213590180|gb|DB963799.1|DB963799
genomic: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAGgtgggttata ... ttgttggcagATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTG
EST: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAG ATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTGEST: gi|213594062|gb|DB961950.1|DB961950
genomic: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAGgtgggttata ... ttgttggcagATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTG
EST: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAG ATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTGEST: gi|120495797|gb|EH223964.1|EH223964
genomic: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAGgtgggttata ... ttgttggcagATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTG
EST: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAG ATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTGEST: gi|105633833|gb|DW247196.1|DW247196
genomic: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAGgtgggttata ... ttgttggcagATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTG
EST: GAGGTGAATTATACCTTCGAGCTTCTGAGCTTCAGAAAGAGGGCAAAAAG ATTATATTTACTAATGTTGGCAACCCACATGCATTGGGACAGAAACCACTG
genomic: GAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAGgtgggttata ... ttgttggcagATTATCTTTACTAATGTTGGCAACCCGCATGCATTGGGACAGAAACCACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGACTATGGGTCAATAAATGAAAACGTGAAGAAGAGTCAATATGCTGTCAGAGGTGAATTATACCTTCGAGCTTCTGAACTTCAGAAAGAGGGCAAAAAGgtgggttataagttattttccaggtcatttacaaaatgttatatttgtttgacttacacgttgcaccctttggttggaggaatacattgatcttgataaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG