1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GAAATGGAAGCAACTGTGGTAGATGGAAATGGGACTGAAACAGGACATATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAGgtctgtttgtgatatcttatatttgttacctggacaatcaatttgtctgtttgcatttgcatggttacttatgcatggttattgcgatgcaacattttcatgattgcag
species | Glycine max |
transcript | GLYMA02G01220.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GACATATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAG ACAATAAGCTACATGGCTGAGCGAGTTGTTGGAAATGGATCATTTGGEST: gi|193637987|gb|FK586223.1|FK586223
genomic: GACATATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAGgtctgtttgt ... atgattgcagACAATAAGCTACATGGCTGAGCGAGTTGTTGGAAATGGATCATTTGG
EST: GACATATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAG ACAATAAGCTACATGGCTGAGCGAGTTGTTGGAAATGGATCATTTGGTGTAEST: gi|120532325|gb|EH260458.1|EH260458
genomic: GACATATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAGgtctgtttgt ... atgattgcagACAATAAGCTACATGGCTGAGCGAGTTGTTGGAAATGGATCATTTGGTGTA
EST: GACATATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAG ACAATAAGCTACATGGCTGAGCGAGTTGTTGGAAATGGATCATTTGGTGTAEST: gi|193329498|gb|FK296064.1|FK296064
genomic: GACATATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAGgtctgtttgt ... atgattgcagACAATAAGCTACATGGCTGAGCGAGTTGTTGGAAATGGATCATTTGGTGTA
EST: GACATATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAG ACAATAAGCTACATGGEST: gi|193586534|gb|FK538560.1|FK538560
genomic: GACATATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAGgtctgtttgt ... atgattgcagACAATAAGCTACATGG
EST: GACGTATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAG ACAATAAGCTACATGGEST: gi|193551204|gb|FK507989.1|FK507989
genomic: GACATATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAGgtctgtttgt ... atgattgcagACAATAAGCTACATGG
EST: TTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAG ACAATAAGCTACATGGCTGAGCGAGTTGTTGGAAATGGATCATTTGGTGTA
genomic: TTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAGgtctgtttgt ... atgattgcagACAATAAGCTACATGGCTGAGCGAGTTGTTGGAAATGGATCATTTGGTGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAATGGAAGCAACTGTGGTAGATGGAAATGGGACTGAAACAGGACATATAATTGTTACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAGgtctgtttgtgatatcttatatttgttacctggacaatcaatttgtctgtttgcatttgcatggttacttatgcatggttattgcgatgcaacattttcatgattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG