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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTTTTCAACTTGTTACTATGCTAAACCCATCTGTCTTGCAAGAAAATGGAGTCCCCGTCTACAGCATACTTCAGGTTTCATTTAGCTTGCTTATCTTTGgtatttttttttcttaatagtttgctattgtaaatgattatttcattgaaattgtaaaattacaagacaaatgtgttaaatttttgcaaatgatatgata...

Basic information

species Glycine max
transcript GLYMA01G42890.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G42890.1 (Glycine max), 5'ss of exon 3
lower sequence: Vv02s0025g03560.t01 (Vitis vinifera), 5'ss of exon 3
-------------------------CTTTTTCAACTTGTTACTATGCTAAACCCATCTGTCTTGCAAGAAAATGGAGTCCCCGTCTACAGCATACTTCAGGTTTCATTTAGCTTGCTTATCTTTGgtatttttttttct-taatagtttgctattgtaaatgattatttcattgaaattgtaaaattacaagacaaatgtgttaaatttttgcaaatgatatgata
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TCTATTTGATGCCCAACCGGATCTGCTCTTTCAGCTTGTGACCATGCTGGACCCATCTGTGTTGCAAGAAAATGGAGTTTCTGTTTATAGTGTAATTCAGgtttgacat---tcaagaac-----acattctattttctacaattttcctctgctgggaaaacacatttaaatggcttattcaaattataag-------tgatggctctttctag-----------