1 5' 3' | 2 5' 3' | 3 5' 3' |
TCAAATAACAACATTCCTGCTCCCAACAACACATTCCAGACCATTTTAACTAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATCTAGTTGCTCTATCTGgtaagactcccagtactttatttgtctatggttttttgccttcaaagcatgtaggtttatggttataatttgttttgatgagtatttacaaacttaacct...
species | Glycine max |
transcript | GLYMA01G37630.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AAGTTCAAGCTTAAGGGGCTTTGACATTGTTGATCTAGTTGCTCTATCTG GGAGCCACACTATAGGAAATTCCCGATGCACCAGCTTCAGGCAAAGACTATEST: gi|6567113|gb|AW234740.1|AW234740
genomic: AAGTTCAAGCTTAAGGGGC-TTGACATTGTTGATCTAGTTGCTCTATCTGgtaagactcc ... aatgttatagGGAGCCACACTATAGGAAATTCCCGATGCACCAGCTTCAGGCAAAGACTAT
EST: TAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATCTAGTTGCTCTATCTG GGAGCCACACTATAGGAAATTCCCGATGCACCAGCTTCAGGCAAAGACTATEST: gi|308098945|gb|HO760786.1|HO760786
genomic: TAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATCTAGTTGCTCTATCTGgtaagactcc ... aatgttatagGGAGCCACACTATAGGAAATTCCCGATGCACCAGCTTCAGGCAAAGACTAT
EST: TAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATCTAGTTGCTCTATCTG GGAGCCACACTATAGGAAATTCCCGATGCACCAGCTTCAGGCAAAGACTATEST: gi|9819343|gb|BE554856.1|BE554856
genomic: TAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATCTAGTTGCTCTATCTGgtaagactcc ... aatgttatagGGAGCCACACTATAGGAAATTCCCGATGCACCAGCTTCAGGCAAAGACTAT
EST: TAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATCTAGTTGCTCTATCTG GGAGCCACACTATAGGAAATTCCCGATGCACCAGCTTCAGGCAAAGACTATEST: gi|192298692|gb|FG990973.1|FG990973
genomic: TAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATCTAGTTGCTCTATCTGgtaagactcc ... aatgttatagGGAGCCACACTATAGGAAATTCCCGATGCACCAGCTTCAGGCAAAGACTAT
EST: TAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATCTAGTTGCTCTATCTG GGAGCCACACTATAGGAAAT
genomic: TAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATCTAGTTGCTCTATCTGgtaagactcc ... aatgttatagGGAGCCACACTATAGGAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAAATAACAACATTCCTGCTCCCAACAACACATTCCAGACCATTTTAACTAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATCTAGTTGCTCTATCTGgtaagactcccagtactttatttgtctatggttttttgccttcaaagcatgtaggtttatggttataatttgttttgatgagtatttacaaacttaacct
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