1 5' 3' | 2 5' 3' | 3 5' 3' |
AGAATGAGAAGAGGATATACACGAGAGGCTTACTTGGATCTTGTGCAAAAAATTCGGAGTATTATTCCAGATGTGGCTTTGAGCAGTGATTTCATTTGTGgtaatacgttttttaaatttctttctccttgtcctttttcctttcctttgttattcattaatttggcattctacaattgtagcgccttaatttcaactaa...
species | Glycine max |
transcript | GLYMA01G37500.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AATTCGGAGTATTATTCCAGATGTGGCTTTGAGCAGTGATTTCATTTGTG GATTTTGTGGAGAAACAGAGGAGGAGCATTCTGAGACGTTGACTCTAATAAEST: gi|193311981|gb|FK276927.1|FK276927
genomic: AATTCGGAGTATTATTCCAGATGTGGCTTTGAGCAGTGATTTCATTTGTGgtaatacgtt ... atgctaacagGATTTTGTGGAGAAACAGAGGAGGAGCATTCTGAGACGTTGACTCTAATAA
EST: AATTCGGAGTATTATTCCAGATGTGGCTTTGAGCAGTGATTTCATTTGTG GATTTTGTGGAGAAACAGAGGAGGAGCATTCTGAGACGTTGACTCTAATAA
genomic: AATTCGGAGTATTATTCCAGATGTGGCTTTGAGCAGTGATTTCATTTGTGgtaatacgtt ... atgctaacagGATTTTGTGGAGAAACAGAGGAGGAGCATTCTGAGACGTTGACTCTAATAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAATGAGAAGAGGATATACACGAGAGGCTTACTTGGATCTTGTGCAAAAAATTCGGAGTATTATTCCAGATGTGGCTTTGAGCAGTGATTTCATTTGTGgtaatacgttttttaaatttctttctccttgtcctttttcctttcctttgttattcattaatttggcattctacaattgtagcgccttaatttcaactaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctttctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cctttcc