1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
AAAGGCATCAGATAGTGAAGAGGAACATCGTAGGAAACTTTTATCTTATGAACGTAGATATTTAGCTGCTGATACTACCTCGTTCAAATGCAGCAGGGAGgtataactgtgttgccctttattcagttgttctttttcatctattctatgttcttttttggaatattgccttgaagaatttatctcacggctaaacttat...
species | Glycine max |
transcript | GLYMA01G36170.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AACGTAGATATTTAGCTGCTGATACTACCTCGTTCAAATGCAGCAGGGAG GGACACGAGCCACTTTTATCTGTCAATGGATTGCACCAGTTACACATCCTCEST: gi|6502443|gb|AW203816.1|AW203816
genomic: AACGTAGATATTTAGCTGCTGATACTACCTCGTTCAAATGCAGCAGGGAGgtataactgt ... gcggttacagGGACACGAGCCACTTTTATCTGTCAATGGATTGCACCAGTTACACATCCTC
EST: AACGTAGATATTTAGCTGCTGATACTACCTCGTTCAAATGCAGCAGGGAG GGACACGAGCCACTTTTATCTGTCAATGGATTGCACCAGTTACACATCCTC
genomic: AACGTAGATATTTAGCTGCTGATACTACCTCGTTCAAATGCAGCAGGGAGgtataactgt ... gcggttacagGGACACGAGCCACTTTTATCTGTCAATGGATTGCACCAGTTACACATCCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAGGCATCAGATAGTGAAGAGGAACATCGTAGGAAACTTTTATCTTATGAACGTAGATATTTAGCTGCTGATACTACCTCGTTCAAATGCAGCAGGGAGgtataactgtgttgccctttattcagttgttctttttcatctattctatgttcttttttggaatattgccttgaagaatttatctcacggctaaacttat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT