1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTGATGGTCGTGACAACACATGAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAGgttgctgactttgacttctttagttttgttagctcattttttgcttttaagtcataaggaattttaaacttttgtttcttaatcacagtcaacactcatt...
species | Glycine max |
transcript | GLYMA01G27840.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAG CTTCCCTTGTCCCTGGTATCAAAAGGEST: gi|27426139|gb|CA937659.1|CA937659
genomic: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAGgttgctgact ... gaaaatgcagCTTCCCTTGTCCCTGGTATCAAAAGG
EST: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAG CTTCCCTTGTCCCTGEST: gi|213599235|gb|DB960003.1|DB960003
genomic: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAGgttgctgact ... gaaaatgcagCTTCCCTTGTCCCTG
EST: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAG CTTCCCTTGTCCCTGGTATCAAAAGGTACCCCTCTCTTTGGCACTTAGTCCEST: gi|16105129|gb|BI892869.1|BI892869
genomic: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAGgttgctgact ... gaaaatgcagCTTCCCTTGTCCCTGGTATCAAAAGGTACCCCTCTCTTTGGCACTTAGTCC
EST: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAG CTTCCCTTGTCCCTGGTATCAAAAGGTACCCCTCTCTTTGGCACTTAGTCCEST: gi|254334106|gb|GR849024.1|GR849024
genomic: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAGgttgctgact ... gaaaatgcagCTTCCCTTGTCCCTGGTATCAAAAGGTACCCCTCTCTTTGGCACTTAGTCC
EST: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAG CTTCCCTTGTCCCTGGTATCAAAAGGTACCCCTCTCTTTGGCACTTAGTCCEST: gi|209712319|gb|BW668507.1|BW668507
genomic: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAGgttgctgact ... gaaaatgcagCTTCCCTTGTCCCTGGTATCAAAAGGTACCCCTCTCTTTGGCACTTAGTCC
EST: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAG CTTCCCTTGTCCCTGGTATCAAAAGGTACCCCTCTCTTTGGCACTTAGTCC
genomic: GAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAGgttgctgact ... gaaaatgcagCTTCCCTTGTCCCTGGTATCAAAAGGTACCCCTCTCTTTGGCACTTAGTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGATGGTCGTGACAACACATGAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAGgttgctgactttgacttctttagttttgttagctcattttttgcttttaagtcataaggaattttaaacttttgtttcttaatcacagtcaacactcatt
- - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - AAGGAA