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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCATGACCACTAGGCCTCGGTCAGATCTTTATGTCAACCTGCCAGCTTTGAGGAAATTAGATAACATGCTTCTGgtaagattttacaccattcagagcacattaatccagtttcaagaaataacacatattaaacattttctctttccgcag

Basic information

species Glycine max
transcript GLYMA01G26010.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G26010.1 (Glycine max), 5'ss of exon 3
lower sequence: AT5G02010.1 (Arabidopsis thaliana), 5'ss of exon 4
GTCATGACCACTAGGCCTCGGTCAGATCTTTATGTCAACCTGCCAGCTTTGAGGAAATTAGATAACATGCTTCTGgtaaga-----------ttttacaccattcagagcacattaatccagtttcaagaaataa----cacata-ttaaacattttctctttccgcag
 | |||||    || ||  | |||||||||||||| ||||| |||||| | |||||| |||||||||||||||| ||||||            ||| |  | | |      |  ||      ||| ||| |  ||    | |||  |||  ||| |||  | |  ||||
ATAATGACTTGCAGACCAAGATCAGATCTTTATGTTAACCTCCCAGCTCTCAGGAAACTAGATAACATGCTTCTTgtaagaacaagtgatctcttttcgtcttcccagtttctctataggtattttaagcagcaaaggtctcattcttattcatcttccatctttgcag