1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' |
AATGGAGCACTTGGACCAATCAGGGAATGGAATCTTACAGACTGTATTGCAGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGAgtaagtatatctgagacttttgggttgcctgactagttttttctgttggttcggcataggtattttgcctgaagattaaataattactaatttgctctga...
species | Glycine max |
transcript | GLYMA07G03850.1 |
intron # | 25 |
splice site | 5' |
intron type | U2 |
EST: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGA GATGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTTGAGGEST: gi|10236760|gb|BE805648.1|BE805648
genomic: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGAgtaagtatat ... actcttgcagGATGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTTGAGG
EST: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGA GATGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTTGAGGEST: gi|7692572|gb|AW760675.1|AW760675
genomic: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGAgtaagtatat ... actcttgcagGATGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTTGAGG
EST: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGA GATGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTTGAGGEST: gi|298175772|gb|HO018369.1|HO018369
genomic: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGAgtaagtatat ... actcttgcagGATGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTTGAGG
EST: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGA GGTGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTCGAGGEST: gi|14205586|gb|BG839264.1|BG839264
genomic: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGAgtaagtatat ... actcttgcagGATGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTTGAGG
EST: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGA GGTGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTCGAGGEST: gi|7685662|gb|AW756310.1|AW756310
genomic: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGAgtaagtatat ... actcttgcagGATGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTTGAGG
EST: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGA GATGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTTGAGG
genomic: AGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGAgtaagtatat ... actcttgcagGATGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTTGAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATGGAGCACTTGGACCAATCAGGGAATGGAATCTTACAGACTGTATTGCAGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGAgtaagtatatctgagacttttgggttgcctgactagttttttctgttggttcggcataggtattttgcctgaagattaaataattactaatttgctctga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA