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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCAGAGGTGTTAGACCCCTTCCACTGCTCGAAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTTgtatgatattgaagtccctctttctttttttggtttattttccctgacattctttaacaactactaatttatatattgtttatgctgtctatctgctttag

Basic information

species Glycine max
transcript GLYMA12G30520.1
intron # 24
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192307606|gb|FG999645.1|FG999645
EST:     AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTT                         GATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
genomic: AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTTgtatgatatt ... tctgctttagGATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
EST: gi|21286017|gb|BQ473888.1|BQ473888
EST:     AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTT                         GATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
genomic: AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTTgtatgatatt ... tctgctttagGATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
EST: gi|4283486|gb|AI440662.1|AI440662
EST:     AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTT                         GATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
genomic: AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTTgtatgatatt ... tctgctttagGATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
EST: gi|10231964|gb|BE800852.1|BE800852
EST:     AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTT                         GATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
genomic: AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTTgtatgatatt ... tctgctttagGATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
EST: gi|151404341|gb|EV274151.1|EV274151
EST:     AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTT                         GATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
genomic: AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTTgtatgatatt ... tctgctttagGATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
EST: gi|151400490|gb|EV270304.1|EV270304
EST:     AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTT                         GATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
genomic: AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTTgtatgatatt ... tctgctttagGATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
EST: gi|51334703|gb|CO978569.1|CO978569
EST:     AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTT                         GATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
genomic: AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTTgtatgatatt ... tctgctttagGATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
EST: gi|298170085|gb|HO018709.1|HO018709
EST:     AGATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTT                         GATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT
genomic: AAATGGCAAACTTATTCAATAGTTACCATTTGACAGTTTGCCCAGGGCTTgtatgatatt ... tctgctttagGATCCCAATCCTAACAATCTTGTTGTGAGTACAACATTTTATTCAGAAAGT