1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' |
GAAATGGCAAATACAGAATACTTGGATGACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAGgtgtgtctttctatctttgtatgttttgtcttcatgaagttcttagttgtatcctgggatggatatggaaatgaaccattgggagttacaagagtaatac...
species | Glycine max |
transcript | GLYMA10G35190.1 |
intron # | 23 |
splice site | 5' |
intron type | U2 |
EST: ACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAG ATAACACGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGGEST: gi|254340254|gb|GR858379.1|GR858379
genomic: ACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAGgtgtgtcttt ... caatccccagATAACACGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGG
EST: ACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAG ATA-CACGA-GAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGGEST: gi|26058666|gb|CA801580.1|CA801580
genomic: ACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAGgtgtgtcttt ... caatccccagATAACACGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGG
EST: ACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAG ATAACACGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGGEST: gi|17963254|gb|BM270005.1|BM270005
genomic: ACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAGgtgtgtcttt ... caatccccagATAACACGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGG
EST: ACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAG ATAACACGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGGEST: gi|51337373|gb|CO981239.1|CO981239
genomic: ACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAGgtgtgtcttt ... caatccccagATAACACGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGG
EST: ACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAG ATAACACGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGGEST: gi|13789586|gb|BG652177.1|BG652177
genomic: ACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAGgtgtgtcttt ... caatccccagATAACACGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGG
EST: CCGGATGACTTCATCATTTCGCTCACTGCACAG ATAACACGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGG
genomic: CCGGATGACTTCATCATTTCGCTCACTGCACAGgtgtgtcttt ... caatccccagATAACACGAAGAGATGAGGAAATGGCTCCTTTTATTTCAAATGCAAAGCGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAATGGCAAATACAGAATACTTGGATGACCAAGATGCTGAAGAGCCGGATGACTTCATCATTTCGCTCACTGCACAGgtgtgtctttctatctttgtatgttttgtcttcatgaagttcttagttgtatcctgggatggatatggaaatgaaccattgggagttacaagagtaatac
- - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - TGAAGA