1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' |
AAGCTTAGCATTGGCTGAGAACCAACCTTTACCTCAGTTGTGTAGTAGTACTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGgtatattaattctatttcattatccatggattttctgtataatttattctctttggaatagtggctgagccattgcatagcacaacgataagattgctgc...
species | Glycine max |
transcript | GLYMA02G17400.1 |
intron # | 23 |
splice site | 5' |
intron type | U2 |
EST: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAG GTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAAEST: gi|7686624|gb|AW757281.1|AW757281
genomic: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGgtatattaat ... ttttatgcagGTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAA
EST: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAG GTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAAEST: gi|120497078|gb|EH225245.1|EH225245
genomic: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGgtatattaat ... ttttatgcagGTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAA
EST: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAG GTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAAEST: gi|8826443|gb|BE210173.1|BE210173
genomic: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGgtatattaat ... ttttatgcagGTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAA
EST: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAG GTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAAEST: gi|13788848|gb|BG651439.1|BG651439
genomic: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGgtatattaat ... ttttatgcagGTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAA
EST: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAG GTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAAEST: gi|254341441|gb|GR850654.1|GR850654
genomic: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGgtatattaat ... ttttatgcagGTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAA
EST: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAG GTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAAEST: gi|120496527|gb|EH224694.1|EH224694
genomic: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGgtatattaat ... ttttatgcagGTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAA
EST: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAG GTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAA
genomic: CTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGgtatattaat ... ttttatgcagGTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGCTTAGCATTGGCTGAGAACCAACCTTTACCTCAGTTGTGTAGTAGTACTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGgtatattaattctatttcattatccatggattttctgtataatttattctctttggaatagtggctgagccattgcatagcacaacgataagattgctgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG