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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACTCATGCAAATACACTTGAGACGCTACGAGAGGATCACGCTGGCCAAGCTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGGgtatgttgattcggtttatattttgttctcgaaagatcaaatataaacatgatttagtagacatgtttaacattaattaacatgtgttgttgcttcctctcttgtcttgcag

Basic information

species Glycine max
transcript GLYMA19G38150.1
intron # 22
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193516268|gb|FK472508.1|FK472508
EST:     CTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGG                         GACTATGAGCCTAGCGGCACAACACCTATAAGATGTGAGCCTGATGTTCCG
genomic: CTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGGgtatgttgat ... tgtcttgcagGACTATGAGCCTAGCGGCACAACACCTATAAGATGTGAGCCTGATGTTCCG
EST: gi|208324497|gb|GE118840.1|GE118840
EST:     CTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGG                         GACTATGAGCCTAGCGGCACAACACCTATAAGATGTGAGCCTGATGTTCCG
genomic: CTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGGgtatgttgat ... tgtcttgcagGACTATGAGCCTAGCGGCACAACACCTATAAGATGTGAGCCTGATGTTCCG
EST: gi|10253726|gb|BE821492.1|BE821492
EST:     CTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGG                         GACTATGAGCCTAGCGGCACAACACCTATAAGATGTGAGCCTGATGTTCCG
genomic: CTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGGgtatgttgat ... tgtcttgcagGACTATGAGCCTAGCGGCACAACACCTATAAGATGTGAGCCTGATGTTCCG
EST: gi|208187772|gb|GD980902.1|GD980902
EST:     CTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGG                         GACTATGAGCCTAGCGGCA
genomic: CTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGGgtatgttgat ... tgtcttgcagGACTATGAGCCTAGCGGCA
EST: gi|31473466|gb|CD415479.1|CD415479
EST:     CTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGG                         GACTATGAGCCTAGCGGCACAACACCTATAAGATGTGAGCCTGATGTTCCG
genomic: CTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGGgtatgttgat ... tgtcttgcagGACTATGAGCCTAGCGGCACAACACCTATAAGATGTGAGCCTGATGTTCCG
EST: gi|193518750|gb|FK476195.1|FK476195
EST:     GAAACTTTTTCTAACGGCAGTACAGG                         GACTATGAGCCTAGCGGCACAACACCTATAAGATGTGAGCCTGATGTTCCG
genomic: GAAAC-TTTTC-AACGGCAGTACAGGgtatgttgat ... tgtcttgcagGACTATGAGCCTAGCGGCACAACACCTATAAGATGTGAGCCTGATGTTCCG