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GTGCAATGCCCACTTGAGGTCATTAATCTCCACCCAAGCAGGGATGTTGCCGTTCTTGACTTCTCCTACAAGTTTGGTAACGATATGgtacataaatttaaacttactaatttcaaaaatcatgatagagttgagttgatcatatccttccaaggctagtataaaaaaatatgcaggttggctactt...
species | Glycine max |
transcript | GLYMA12G30520.1 |
intron # | 22 |
splice site | 5' |
intron type | U2 |
EST: GCAGGGATGTTGCCGTTCTTGACTTCTCCTACAAGTTTGGTAACGATATG GTCAATGTCAAGCTTCGCCTACCTGCTGTCCTAAATAAATTTCTTCAGCCTEST: gi|298199238|gb|HO042601.1|HO042601
genomic: GCAGGGATGTTGCCGTTCTTGACTTCTCCTACAAGTTTGGTAACGATATGgtacataaat ... tgcttcacagGTCAATGTCAAGCTTCGCCTACCTGCTGTCCTAAATAAATTTCTTCAGCCT
EST: GCAGGGATGTTGCCGTTCTTGACTTCTCCTACAAGTTTGGTAACGATATG GTCAATGTCAAGCTTCGCCTACCTGCTGTCEST: gi|10231964|gb|BE800852.1|BE800852
genomic: GCAGGGATGTTGCCGTTCTTGACTTCTCCTACAAGTTTGGTAACGATATGgtacataaat ... tgcttcacagGTCAATGTCAAGCTTCGCCTACCTGCTGTC
EST: GGTAACGATATG GTCAATGTCAAGCTTCGCCTACCTGCTGTCCTAAATAAATTTCTTCAGCCTEST: gi|151404341|gb|EV274151.1|EV274151
genomic: GGTAACGATATGgtacataaat ... tgcttcacagGTCAATGTCAAGCTTCGCCTACCTGCTGTCCTAAATAAATTTCTTCAGCCT
EST: GCAGGGATGTTGCCGTTCTTGACTTCTCCTACAAGTTTGGTAACGATATG GTCAATGTCAAGCTTCGCCTACCTGCTGTCCTAAATAAATTTCTTCAGCCT
genomic: GCAGGGATGTTGCCGTTCTTGACTTCTCCTACAAGTTTGGTAACGATATGgtacataaat ... tgcttcacagGTCAATGTCAAGCTTCGCCTACCTGCTGTCCTAAATAAATTTCTTCAGCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGCAATGCCCACTTGAGGTCATTAATCTCCACCCAAGCAGGGATGTTGCCGTTCTTGACTTCTCCTACAAGTTTGGTAACGATATGgtacataaatttaaacttactaatttcaaaaatcatgatagagttgagttgatcatatccttccaaggctagtataaaaaaatatgcaggttggctactt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tccttcca
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