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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGACTAGAAAAGAACAAATTATCTGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACTgtaagttctgtctcttttgttttaattatttaaacaaattgccattataattctctggaaagatcatgtcacttgtacctaacaagttgattatggattgtaaattttgcag

Basic information

species Glycine max
transcript GLYMA06G05900.1
intron # 22
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207735464|gb|GD710307.1|GD710307
EST:     TTATCTGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACT                         TAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
genomic: TTATCTGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACTgtaagttctg ... aattttgcagTAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
EST: gi|208308475|gb|GE103687.1|GE103687
EST:     TTATCTGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACT                         TAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
genomic: TTATCTGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACTgtaagttctg ... aattttgcagTAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
EST: gi|192296635|gb|FG991203.1|FG991203
EST:     TATCTGGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACT                         TAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
genomic: TATCTGGGG-ATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACTgtaagttctg ... aattttgcagTAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
EST: gi|207838799|gb|GD810461.1|GD810461
EST:     TTATCTGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACT                         TAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
genomic: TTATCTGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACTgtaagttctg ... aattttgcagTAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
EST: gi|193405997|gb|FK370854.1|FK370854
EST:     TATCTGGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACT                         TAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
genomic: TATCT-GGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACTgtaagttctg ... aattttgcagTAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
EST: gi|193431703|gb|FK395209.1|FK395209
EST:     TTATCTGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACT                         TAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
genomic: TTATCTGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACTgtaagttctg ... aattttgcagTAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
EST: gi|193342439|gb|FK306083.1|FK306083
EST:     TTATCTGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACT                         TAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT
genomic: TTATCTGGGGATGTGTCTTCGCTTGCAAATTGCTTTAGTCTTTCTCTACTgtaagttctg ... aattttgcagTAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCACAAGCAAGAATTT