1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' |
GGGGTTCTCCATTGGGTTGCTCAACCTTCTCCTGGAGTTGATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAGgttggctattcttcatgtccggctggtctttttacatgtatattcttgtttgctaataatatttccctgttatggttaaatcactgcaatag
species | Glycine max |
transcript | GLYMA20G25120.1 |
intron # | 21 |
splice site | 5' |
intron type | U2 |
EST: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAG AATCCCGCTGAACTTGACAACTGGCTTGGCGATTTGAACCCAAATTCCAAAEST: gi|14999379|gb|BI320344.1|BI320344
genomic: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAGgttggctatt ... actgcaatagAATCCCGCTGAACTTGACAACTGGCTTGGCGATTTGAACCCAAATTCCAAA
EST: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAG AATCCCGCTGAACTTGACAACTGGCTTGGCGATTTGAACCCAAATTCCAAAEST: gi|14991826|gb|BI317499.1|BI317499
genomic: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAGgttggctatt ... actgcaatagAATCCCGCTGAACTTGACAACTGGCTTGGCGATTTGAACCCAAATTCCAAA
EST: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAG AATCCCGCTGAACTTGACAACTGGCTTGGCGATTTGAACCCAAATTCCAAAEST: gi|193656731|gb|FK603763.1|FK603763
genomic: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAGgttggctatt ... actgcaatagAATCCCGCTGAACTTGACAACTGGCTTGGCGATTTGAACCCAAATTCCAAA
EST: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAG AATCCCGCTGAACTTGACAACTGGCTTGGCGATTTGAACCCAAATTCCAAAEST: gi|7685172|gb|AW755820.1|AW755820
genomic: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAGgttggctatt ... actgcaatagAATCCCGCTGAACTTGACAACTGGCTTGGCGATTTGAACCCAAATTCCAAA
EST: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAG AATCCCGCTGAACTTGACAACTGGCTTGGCGATTGGAACCCAAATTCCAAAEST: gi|21601019|gb|BQ611350.1|BQ611350
genomic: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAGgttggctatt ... actgcaatagAATCCCGCTGAACTTGACAACTGGCTTGGCGATTTGAACCCAAATTCCAAA
EST: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAG AATCCCGCTGAACTTGACAACTGGCTTGGCGATTTGAACCCAAATTCCAAA
genomic: ATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAGgttggctatt ... actgcaatagAATCCCGCTGAACTTGACAACTGGCTTGGCGATTTGAACCCAAATTCCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGGTTCTCCATTGGGTTGCTCAACCTTCTCCTGGAGTTGATCCATTGAAGGTGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAGgttggctattcttcatgtccggctggtctttttacatgtatattcttgtttgctaataatatttccctgttatggttaaatcactgcaatag
- - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG