1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' |
ATGTGATGTTGAACTCATACTAAAGGATGGACATTTCCAATTCTGAATATTGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAGgtagtctttaccctgttccaaaagttatttttgactccaaagaaggcaaggactgcccagcattgcttaatgtgttgtaatcttttccttactacctaaa...
species | Glycine max |
transcript | GLYMA17G18540.1 |
intron # | 21 |
splice site | 5' |
intron type | U2 |
EST: TGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAG GTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTGEST: gi|209726309|gb|BW659622.1|BW659622
genomic: TGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAGgtagtcttta ... atgcatgcagGTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTG
EST: TGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAG GTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTGEST: gi|254338076|gb|GR849708.1|GR849708
genomic: TGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAGgtagtcttta ... atgcatgcagGTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTG
EST: TGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAG GTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTGEST: gi|6072279|gb|AW101666.1|AW101666
genomic: TGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAGgtagtcttta ... atgcatgcagGTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTG
EST: TGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAG GTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTGEST: gi|193334751|gb|FK300571.1|FK300571
genomic: TGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAGgtagtcttta ... atgcatgcagGTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTG
EST: GTTGACAAGAGGACAGTTGATTGCAG GTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTGEST: gi|46492716|gb|CN472272.1|CN472272
genomic: GTTGACAAGAGGACAGTTGATTGCAGgtagtcttta ... atgcatgcagGTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTG
EST: TGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAG GTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTG
genomic: TGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAGgtagtcttta ... atgcatgcagGTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTGATGTTGAACTCATACTAAAGGATGGACATTTCCAATTCTGAATATTGACCGCAGTGTGTTTCAACACAGGTTGACAAGAGGACAGTTGATTGCAGgtagtctttaccctgttccaaaagttatttttgactccaaagaaggcaaggactgcccagcattgcttaatgtgttgtaatcttttccttactacctaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA