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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTGGATTCTCAAATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAAgtatgtttacatcagtgccagttttaaaactctgcatcttttcctttatctttagtaaaacaccatcagaaaagtgttatatattccaggaagttcaatg...

Basic information

species Glycine max
transcript GLYMA10G35210.1
intron # 21
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192303192|gb|FG997768.1|FG997768
EST:     AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAA                         AGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
genomic: AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAAgtatgtttac ... catatttcagAGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
EST: gi|192334522|gb|FK024481.1|FK024481
EST:     AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAA                         AGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
genomic: AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAAgtatgtttac ... catatttcagAGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
EST: gi|207807592|gb|GD776611.1|GD776611
EST:     AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAA                         AGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGGTTGGGGGCG
genomic: AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAAgtatgtttac ... catatttcagAGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTG-TTGGGGGCG
EST: gi|192334521|gb|FK024480.1|FK024480
EST:     AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAA                         AGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
genomic: AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAAgtatgtttac ... catatttcagAGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
EST: gi|192301842|gb|FG997700.1|FG997700
EST:     AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAA                         AGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
genomic: AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAAgtatgtttac ... catatttcagAGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
EST: gi|213605266|gb|DB978740.1|DB978740
EST:     AGGGATTCAATCCAGCATAGCCAA                         AGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTCGTCTTTGTTGGGGGCGT
genomic: AGGGATTCAATCCAGCATAGCCAAgtatgtttac ... catatttcagAGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
EST: gi|120493752|gb|EH221919.1|EH221919
EST:     AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAA                         AGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
genomic: AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAAgtatgtttac ... catatttcagAGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
EST: gi|120493838|gb|EH222005.1|EH222005
EST:     TATCA-GGATTCAATCCAGCATAGCCAA                         AGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
genomic: TATCAGGGATTCAATCCAGCATAGCCAAgtatgtttac ... catatttcagAGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
EST: gi|208086974|gb|GD883340.1|GD883340
EST:     AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAA                         AGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
genomic: AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAAgtatgtttac ... catatttcagAGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
EST: gi|208275482|gb|GE078186.1|GE078186
EST:     AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAA                         AGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
genomic: AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAAgtatgtttac ... catatttcagAGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
EST: gi|192303193|gb|FG997769.1|FG997769
EST:     AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAA                         AGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT
genomic: AATAGCCCATCATTTGACACTTTATCAGGGATTCAATCCAGCATAGCCAAgtatgtttac ... catatttcagAGTACCTGATGGAAGGCGTGCTGTGGTGCTTGTTGTCTTTGTTGGGGGCGT